species:   Artha
pid:       MI0001025
parent:    ath-MIR399f
paralog:   
locus:     2:14444997-14445114
matures:   ['UGCCAAAGGAGAUUUGCCCGG', 'GGGCAAGAUCACCAUUGGCAGA']
srr:       SRR9216050
genome:    /Users/jax/+Genomes/Plant_genomes/Artha.TAIR10_chr_all.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216050.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216050.cram 2:14444997-14445114

0 out of bounds
2 alignments
2 proper strand
2 stranded perfect matches

          ***********************                                                     **********************          
AUAUGCAUUACAGGGCAAGAUCACCAUUGGCAGAGAUCUAUUACUUCAUUCUUGCAUCAUAUGCAUAAAUGUUUGUGGUGAGCUCUCUGCCAAAGGAGAUUUGCCCGGUAAUUCUCUU
......(((((.(((((.((((.((.((((((((((.(((((((..((((..(((((...)))))..))))...))))).)).)))))))))).)).))))))))).)))))......
---------------------------------------------------------------------------------------UGCCAAAGGAGAUUUGCCCGG---------- l=21 a=0 c
------------GGGCAAGAUCACCAUUGGCAGA------------------------------------------------------------------------------------ l=22 a=0 c*
------------GGGCAAGAUCACCAUUGGCAG------------------------------------------------------------------------------------- l=21 a=2 ma
----------------------------------------------------------------------------------------GCCAAAGGAGAUUUGCCCGG---------- l=20 a=0 ma*

------------GGGCAAGAUCACCAUUGGCAG------------------------------------------------------------------------------------- l=21 a=2 (ma)

mb-01011
ax-1011111
ku-01
ss-111111111110
fn-011
